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Abstract. The exchange of trace gases between the biosphere and the atmosphere is an important process that controls both chemical and physical properties of the atmosphere with implications for air quality and climate change. The terrestrial biosphere is a major source of reactive biogenic volatile organic compounds (BVOCs) that govern atmospheric concentrations of the hydroxy radical (OH) and ozone (O3) and control the formation andgrowth of secondary organic aerosol (SOA). Common simulations of BVOCsurface–atmosphere exchange in chemical transport models use parameterizations derived from the growing season and do not considerpotential changes in emissions during seasonal transitions. Here, we useobservations of BVOCs over a mixed temperate forest in northern Wisconsinduring broadleaf senescence to better understand the effects of the seasonal changes in canopy conditions (e.g., temperature, sunlight, leaf area, and leaf stage) on net BVOC exchange. The BVOCs investigated here include the terpenoids isoprene (C5H8), monoterpenes (MTs; C10H16), a monoterpene oxide (C10H16O), and sesquiterpenes (SQTs; C15H24), as well as a subset of other monoterpene oxides and dimethyl sulfide (DMS). During this period, MTs were primarily composed of α-pinene, β-pinene, and camphene, with α-pinene and camphene dominant during the first half of September and β-pinene thereafter. We observed enhanced MT and monoterpene oxide emissions following the onset of leaf senescence and suggest that senescence has the potential to be a significant control on late-season MT emissions in this ecosystem. We show that common parameterizations of BVOC emissions cannot reproduce the fluxes of MT, C10H16O, and SQT during the onset and continuation of senescence but can correctly simulate isoprene flux. We also describe the impact of the MT emission enhancement on the potential to form highly oxygenated organic molecules (HOMs). The calculated production rates of HOMs and H2SO4, constrained by terpene and DMS concentrations, suggest that biogenic aerosol formation and growth in this region should be dominated by secondary organics rather than sulfate. Further, we show that models using parameterized MT emissions likely underestimate HOM production, and thus aerosol growth and formation, during early autumn in this region. Further measurements of forest–atmosphere BVOC exchange during seasonal transitions as well as measurements of DMS in temperate regions are needed to effectively predict the effects of canopy changes on reactive carbon cycling and aerosol production. 

Abstract. Oceanic emissions of dimethyl sulfide (CH3SCH3,DMS) have long been recognized to impact aerosol particle composition andsize, the concentration of cloud condensation nuclei (CCN), and Earth'sradiation balance. The impact of oceanic emissions of methanethiol(CH3SH, MeSH), which is produced by the same oceanic precursor as DMS,on the volatile sulfur budget of the marine atmosphere is largelyunconstrained. Here we present direct flux measurements of MeSH oceanicemissions using the eddy covariance (EC) method with a high-resolutionproton-transfer-reaction time-of-flight mass spectrometer (PTR-ToFMS)detector and compare them to simultaneous flux measurements of DMS emissionsfrom a coastal ocean site. Campaign mean mixing ratios of DMS and MeSH were72 ppt (28–90 ppt interquartile range) and 19.1 ppt (7.6–24.5 pptinterquartile range), respectively. Campaign mean emission fluxes of DMS (FDMS) and MeSH (FMeSH) were 1.13 ppt m s−1 (0.53–1.61 ppt m s−1 interquartile range) and 0.21 ppt m s−1 (0.10–0.31 ppt m s−1 interquartile range), respectively. Linear least squares regression of observed MeSH and DMS flux indicates the emissions are highly correlatedwith each other (R2=0.65) over the course of the campaign,consistent with a shared oceanic source. The campaign mean DMS to MeSH fluxratio (FDMS:FMeSH) was 5.5 ± 3.0, calculated from the ratio of 304 individual coincident measurements of FDMS and FMeSH. Measured FDMS:FMeSH was weakly correlated (R2=0.15) withocean chlorophyll concentrations, with FDMS:FMeSH reaching a maximumof 10.8 ± 4.4 during a phytoplankton bloom period. No other volatilesulfur compounds were observed by PTR-ToFMS to have a resolvable emissionflux above their flux limit of detection or to have a gas-phase mixing ratio consistently above their limit of detection during the study period,suggesting DMS and MeSH are the dominant volatile organic sulfur compoundsemitted from the ocean at this site. The impact of this MeSH emission source on atmospheric budgets of sulfurdioxide (SO2) was evaluated by implementing observed emissions in a coupled ocean–atmosphere chemical box model using a newly compiled MeSHoxidation mechanism. Model results suggest that MeSH emissions lead toafternoon instantaneous SO2 production of 2.5 ppt h−1, which results in a 43 % increase in total SO2 production compared to a casewhere only DMS emissions are considered and accounts for 30% of theinstantaneous SO2 production in the marine boundary layer at the meanmeasured FDMS and FMeSH. This contribution of MeSH to SO2production is driven by a higher effective yield of SO2 from MeSHoxidation and the shorter oxidation lifetime of MeSH compared to DMS. Thislarge additional source of marine SO2 has not been previouslyconsidered in global models of marine sulfur cycling. The field measurementsand modeling results presented here demonstrate that MeSH is an importantcontributor to volatile sulfur budgets in the marine atmosphere and must be measured along with DMS in order to constrain marine sulfur budgets. Thislarge additional source of marine–reduced sulfur from MeSH will contribute to particle formation and growth and CCN abundance in the marine atmosphere, with subsequent impacts on climate. 

We use observations from dual high‐resolution mass spectrometers to characterize ecosystem‐atmosphere fluxes of reactive carbon across an extensive range of volatile organic compounds (VOCs) and test how well that exchange is represented in current chemical transport models. Measurements combined proton‐transfer reaction mass spectrometry (PTRMS) and iodide chemical ionization mass spectrometry (ICIMS) over a Colorado pine forest; together, these techniques have been shown to capture the majority of ambient VOC abundance and reactivity. Total VOC mass and associated OH reactivity fluxes were dominated by emissions of 2‐methyl‐3‐buten‐2‐ol, monoterpenes, and small oxygenated VOCs, with a small number of compounds detected by PTRMS driving the majority of both net and upward exchanges. Most of these dominant species are explicitly included in chemical models, and we find here that GEOS‐Chem accurately simulates the net and upward VOC mass and OH reactivity fluxes under clear sky conditions. However, large upward terpene fluxes occurred during sustained rainfall, and these are not captured by the model. Far more species contributed to the downward fluxes than are explicitly modeled, leading to a major underestimation of this key sink of atmospheric reactive carbon. This model bias mainly reflects missing and underestimated concentrations of depositing species, though inaccurate deposition velocities also contribute. The deposition underestimate is particularly large for assumed isoprene oxidation products, organic acids, and nitrates—species that are primarily detected by ICIMS. Net ecosystem‐atmosphere fluxes of ozone reactivity were dominated by sesquiterpenes and monoterpenes, highlighting the importance of these species for predicting near‐surface ozone, oxidants, and aerosols.

 

Abstract. We report on the development, characterization, and fielddeployment of a fast-time-response sensor for measuring ozone (O3) andnitrogen dioxide (NO2) concentrations utilizing chemical ionizationtime-of-flight mass spectrometry (CI-ToFMS) with oxygen anion(O2-) reagent ion chemistry. Wedemonstrate that the oxygen anion chemical ionization mass spectrometer(Ox-CIMS) is highly sensitive to both O3 (180 counts s−1 pptv−1) and NO2 (97 counts s−1 pptv−1), corresponding todetection limits (3σ, 1 s averages) of 13 and 9.9 pptv,respectively. In both cases, the detection threshold is limited by themagnitude and variability in the background determination. The short-termprecision (1 s averages) is better than 0.3 % at 10 ppbv O3 and 4 %at 10 pptv NO2. We demonstrate that the sensitivity of the O3measurement to fluctuations in ambient water vapor and carbon dioxide isnegligible for typical conditions encountered in the troposphere. Theapplication of the Ox-CIMS to the measurement of O3 vertical fluxesover the coastal ocean, via eddy covariance (EC), was tested during the summer of2018 at Scripps Pier, La Jolla, CA. The observed mean ozone depositionvelocity (vd(O3)) was 0.013 cm s−1 with a campaign ensemblelimit of detection (LOD) of 0.0027 cm s−1 at the 95 % confidencelevel, from each 27 min sampling period LOD. The campaign mean and 1standard deviation range of O3 mixing ratios was 41.2±10.1 ppbv. Several fast ozone titration events from local NO emissions weresampled where unit conversion of O3 to NO2 was observed,highlighting instrument utility as a total odd-oxygen (Ox=O3+NO2) sensor. The demonstrated precision, sensitivity, and timeresolution of this instrument highlight its potential for directmeasurements of O3 ocean–atmosphere and biosphere–atmosphere exchangefrom both stationary and mobile sampling platforms. 

Dry deposition, the second largest removal process of ozone (O₃) in the troposphere, plays a role in controlling the natural variability of surface O₃concentrations. Terrestrial ecosystems remove O₃either through stomatal uptake or nonstomatal processes. In chemical transport models, nonstomatal pathways are roughly constrained and may not correctly capture total O₃loss. To address this, the first simultaneous eddy covariance measurements of O₃and formic acid (HCOOH), a tracer of in‐canopy oxidation of biogenic terpenes, were made in a mixed temperate forest in Northern Wisconsin. Daytime maximum O₃deposition velocities,v_d(O₃), ranged between 0.5 and 1.2 cm s⁻¹. Comparison of observedv_d(O₃) with observationally constrained estimates of stomatal uptake and parameterized estimates of cuticular and soil uptake reveal a large (10%–90%) residual nonstomatal contribution tov_d(O₃). The residual downward flux of O₃was well correlated with measurements of HCOOH upward flux, suggesting unaccounted for in‐canopy gas‐phase chemistry.

 

Oceans emit large quantities of dimethyl sulfide (DMS) to the marine atmosphere. The oxidation of DMS leads to the formation and growth of cloud condensation nuclei (CCN) with consequent effects on Earth’s radiation balance and climate. The quantitative assessment of the impact of DMS emissions on CCN concentrations necessitates a detailed description of the oxidation of DMS in the presence of existing aerosol particles and clouds. In the unpolluted marine atmosphere, DMS is efficiently oxidized to hydroperoxymethyl thioformate (HPMTF), a stable intermediate in the chemical trajectory toward sulfur dioxide (SO 2 ) and ultimately sulfate aerosol. Using direct airborne flux measurements, we demonstrate that the irreversible loss of HPMTF to clouds in the marine boundary layer determines the HPMTF lifetime ( τ HPMTF < 2 h) and terminates DMS oxidation to SO 2 . When accounting for HPMTF cloud loss in a global chemical transport model, we show that SO 2 production from DMS is reduced by 35% globally and near-surface (0 to 3 km) SO 2 concentrations over the ocean are lowered by 24%. This large, previously unconsidered loss process for volatile sulfur accelerates the timescale for the conversion of DMS to sulfate while limiting new particle formation in the marine atmosphere and changing the dynamics of aerosol growth. This loss process potentially reduces the spatial scale over which DMS emissions contribute to aerosol production and growth and weakens the link between DMS emission and marine CCN production with subsequent implications for cloud formation, radiative forcing, and climate. 

We report on the sensitivity of enhanced ozone (O3) production, observed during lake breeze circulation along the coastline of Lake Michigan, to the concentrations of nitrogen oxides (NOx = NO + NO2) and volatile organic compounds (VOCs). We assess the sensitivity of O3 production to NOx and VOC on a high O3 day during the Lake Michigan Ozone Study 2017 (LMOS 2017) using an observationally-constrained chemical box model that implements the Master Chemical Mechanism (MCM v3.3.1) and recent emission inventories for NOx and VOCs. The MCM model is coupled to a backward air mass trajectory analysis from a ground supersite in Zion, IL where an extensive series of measurements of O3 precursors and their oxidation products, including hydrogen peroxide (H2O2), nitric acid (HNO3), and particulate nitrates (NO3-) serve as model constraints. We evaluate the chemical evolution of the Chicago-Gary urban plume as it advects over Lake Michigan and demonstrate how modeled indicators of VOC- vs. NOx- sensitive regimes can be constrained by measurements at the trajectory endpoint. Using the modeled ratio of the instantaneous H2O2 and HNO3 production rates (PH2O2 / PHNO3), we suggest that O3 production over the urban source region is strongly VOC-sensitive and progresses towards a more NOx-sensitive regime as the plume advects north along the Lake Michigan coastline on this day. We also demonstrate that ground-based measurements of the mean concentration ratio of H2O2 to HNO3 describe the sensitivity of O3 production to VOC and NOx as the integral of chemical production along the plume path.